Publications

View all publications (26)2023 (2)2022 (2)2021 (2)2020 (5)2019 (3)2017 (1)2016 (1)2015 (1)2014 (1)2012 (1)2011 (2)2010 (1)2009 (3)2007 (1)

2023 (2)

inproceedings - EMTE: An Enhanced Medical Terms Extractor using pattern matching rules
15th international conference on agents and artificial intelligence (ICAART 2023) / Lisbon, Portugal (Volume 2, 2023, Pages pages 301 - 311)
Bou Hatoum, Monah | Charr, Jean-claude | Ghaddar, Alia | Guyeux, Christophe | Laiymani, David
pdf | doi | bibtex@inproceedings{2d4c2089-5869-4a0a-ae0e-c05aa9e409ac, title = {EMTE: An Enhanced Medical Terms Extractor using pattern matching rules}, author = {Bou Hatoum, Monah and Charr, Jean-claude and Ghaddar, Alia and Guyeux, Christophe and Laiymani, David}, year = {2023}, address = {Lisbon, Portugal}, booktitle = {15th international conference on agents and artificial intelligence (ICAART 2023)}, editor = {2d4c2089-5869-4a0a-ae0e-c05aa9e409ac-editor.pdf}, month = {feb}, pages = {301 - 311}, url = {https://publiweb.femto-st.fr/tntnet/entries/19543/documents/author/data}, volume = {2}, doi = {10.5220/0011717300003393} }
inproceedings - UTP: A Unified Term Presentation Tool for Clinical Textual Data Using Pattern-Matching Rules and Dictionary-Based Ontologies
15th international conference on agents and artificial intelligence (ICAART 2023) / Lisbon, Portugal (Publisher : Springer, Volume 14546, Series Lecture Notes in Computer Science (LNCS), 2023, Pages pages 353 - 369)
Bou Hatoum, Monah | Charr, Jean-claude | Guyeux, Christophe | Laiymani, David | Ghaddar, Alia
pdf | doi | bibtex@inproceedings{e381c15c-21cc-4c69-a0a2-40d60d4d9a8c, title = {UTP: A Unified Term Presentation Tool for Clinical Textual Data Using Pattern-Matching Rules and Dictionary-Based Ontologies}, author = {Bou Hatoum, Monah and Charr, Jean-claude and Guyeux, Christophe and Laiymani, David and Ghaddar, Alia}, year = {2023}, address = {Lisbon, Portugal}, booktitle = {15th international conference on agents and artificial intelligence (ICAART 2023)}, editor = {}, month = {feb}, pages = {353 - 369}, url = {https://publiweb.femto-st.fr/tntnet/entries/20436/documents/author/data}, volume = {14546}, doi = {10.1007/978-3-031-55326-4_17}, publisher = {Springer}, series = {Lecture Notes in Computer Science (LNCS)} }

2022 (2)

article - Partial coverage optimization under network connectivity constraints in heterogeneous sensor networks
Computer Networks ( 2022)
Charr, Jean-claude | Deschinkel, Karine | Haj Mansour, Rania | Hakem, Mourad
doi
article - A New Fault-Tolerant Algorithm Based on Replication and Preemptive Migration in Cloud Computing
International Journal of Cloud Applications and Computing (IJCAC) (Volume 12, Issue (1), 2022, Pages :14 (14))
Semmoud, Abderraziq | Hakem, Mourad | Benmammar, Badr | Charr, Jean-claude
pdf | doi

2021 (2)

inproceedings - Impact of eigensolvers on spectral clustering
3rd IEEE Middle East and North Africa COMMunications Conference (MENACOMM 2021) / Agadir, Morocco (2021, Pages pages 49 - 53)
Matar, Johny | El Khoury, Hicham | Charr, Jean-claude | Guyeux, Christophe
pdf | doi | bibtex@inproceedings{23bde3ba-0986-4b7c-a44e-a72c5990bc02, title = {Impact of eigensolvers on spectral clustering}, author = {Matar, Johny and El Khoury, Hicham and Charr, Jean-claude and Guyeux, Christophe}, year = {2021}, address = {Agadir, Morocco}, booktitle = {3rd IEEE Middle East and North Africa COMMunications Conference (MENACOMM 2021)}, editor = {23bde3ba-0986-4b7c-a44e-a72c5990bc02-editor.pdf}, month = {dec}, pages = {49 - 53}, url = {https://publiweb.femto-st.fr/tntnet/entries/18383/documents/author/data}, doi = {10.1109/MENACOMM50742.2021.9678223} }
article - OSIP1 is a self‐assembling DUF3129 protein required to protect fungal cells from toxins and stressors
Environmental Microbiology (Volume 23, Issue (3), mar 2021, Pages :1594 - 1607)
Valette, Nicolas | Renou, Julien | Boutillat, Alexis | Fernández-Gonzáleza, Antonio José | Gautier, Valérie | Silar, Philippe | Guyeux, Christophe | Charr, Jean-claude | Cuenot, Stéphane | Gelhaye, Eric | Morel-Rouhier, Mélanie
pdf | doi

2020 (5)

article - Complex evolutionary history of coffees revealed by full plastid genomes and 28,800 nuclear SNP analyses, with particular emphasis on Coffea canephora (Robusta coffee)
Molecular Phylogenetics and Evolution (Volume 151, oct 2020, Pages :106906 (13))
Charr, Jean-claude | Garavito, Andrea | Guyeux, Christophe | Crouzillat, Dominique | Descombes, Patrick | Fournier, Coralie | Ndiawar Ly, Serigne | Raharimalalaf, Eva N. | Rakotomalala, Jean-Jacques | Stoffelen, Piet | Janssens, Steven | Hamon, Perla | Guyot, Romain
doi
article - Lifetime optimization for partial coverage in heterogeneous sensor networks
Ad Hoc Networks (Volume 107, oct 2020, Pages :102264 (16))
Charr, Jean-claude | Deschinkel, Karine | Haj Mansour, Rania | Hakem, Mourad
pdf | doi
article - Load balancing in cloud computing environments based on adaptive starvation threshold
Concurrency and Computation-Practice & Experience (Volume 32, Issue (11), jun 2020, Pages :e5652 (19))
Semmoud, Abderraziq | Hakem, Mourad | Benmammar, Badr | Charr, Jean-claude
doi
article - Chloroplast genomes of Rubiaceae: Comparative genomics and molecular phylogeny in subfamily Ixoroideae
Plos One (Volume 15, Issue (4), 2020, Pages :0232295 (21))
Ndiawar Ly, Serigne | Garavito, Andrea | De Block, Petra | Asselman, Pieter | Guyeux, Christophe | Charr, Jean-claude | Janssens, Steven | Mouly, Arnaud | Hamon, Perla | Guyot, Romain
doi
article - Advances in the enumeration of foldable self-avoiding walks
International Journal of Computational Science and Engineering (Volume 22, Issue (4), 2020, Pages :365 - 375)
Guyeux, Christophe | Charr, Jean-claude | Bou Abdo, Jacques | Demerjian, Jacques

2019 (3)

article - SpCLUST: Towards a fast and reliable clustering for potentially divergent biological sequences
Computers in Biology and Medicine (Volume 114, nov 2019, Pages :103439 (14))
Matar, Johnny | El Khoury, Hicham | Charr, Jean-claude | Guyeux, Christophe | Chrétien, Stéphane
pdf | doi
inproceedings - Optimizing the Lifetime of Heterogeneous Sensor Networks Under Coverage Constraint : MILP and Genetic Based Approaches
15th International Conference on Wireless and Mobile Computing, Networking and Communications (WiMob 2019) / Barcelona, Spain (2019, Pages pages 6)
Charr, Jean-claude | Deschinkel, Karine | Haj Mansour, Rania | Hakem, Mourad
pdf | doi | bibtex@inproceedings{6a8eeee0-dcb7-4d13-bbcd-34daaa5ac232, title = {Optimizing the Lifetime of Heterogeneous Sensor Networks Under Coverage Constraint : MILP and Genetic Based Approaches}, author = {Charr, Jean-claude and Deschinkel, Karine and Haj Mansour, Rania and Hakem, Mourad}, year = {2019}, address = {Barcelona, Spain}, booktitle = {15th International Conference on Wireless and Mobile Computing, Networking and Communications (WiMob 2019)}, month = {oct}, pages = {6}, url = {https://publiweb.femto-st.fr/tntnet/entries/16222/documents/author/data}, doi = {10.1109/WiMOB.2019.8923327} }
article - Evaluation of chloroplast genome annotation tools and application to analysis of the evolution of coffee species
Plos One (Volume 14, Issue (6), 2019, Pages :e0216347 (20))
Guyeux, Christophe | Charr, Jean-claude | Tran, Hue T.M. | Furtado, Agnelo | Henry, Robert J. | Crouzillat, Dominique | Guyot, Romain | Hamon, Perla
doi

2017 (1)

article - Energy Consumption Reduction for Asynchronous Message Passing Applications
The Journal of Supercomputing (Volume 73, Issue (6), jun 2017, Pages :2369 - 2401)
Fanfakh, Ahmed | Charr, Jean-claude | Couturier, Raphael | Giersch, Arnaud
pdf | doi

2016 (1)

article - Optimizing the energy consumption of message passing applications with iterations executed over grids
Journal of Computational Science (Volume 17, Issue (3), nov 2016, Pages :562 - 575)
Fanfakh, Ahmed | Charr, Jean-claude | Couturier, Raphael | Giersch, Arnaud
pdf | doi

2015 (1)

inproceedings - Energy Consumption Reduction with DVFS for Message Passing Iterative Applications on Heterogeneous Architectures
29th International Parallel and Distributed Processing Symposium (IPDPS 2015) / Hyderabad, India (Publisher : IEEE, 2015, Pages pages 922 - 931)
Charr, Jean-claude | Couturier, Raphael | Fanfakh, Ahmed | Giersch, Arnaud
pdf | doi | bibtex@inproceedings{ccfg15:ip, title = {Energy Consumption Reduction with DVFS for Message Passing Iterative Applications on Heterogeneous Architectures}, author = {Charr, Jean-claude and Couturier, Raphael and Fanfakh Badri Muslim, Ahmed and Giersch, Arnaud}, year = {2015}, address = {Hyderabad, India}, booktitle = {29th International Parallel and Distributed Processing Symposium (IPDPS 2015)}, month = {may}, pages = {922 - 931}, url = {https://publiweb.femto-st.fr/tntnet/entries/11208/documents/author/data}, doi = {10.1109/IPDPSW.2015.44}, publisher = {IEEE} }

2014 (1)

inproceedings - Dynamic frequency scaling for energy consumption reduction in synchronous distributed applications
ISPA 2014, 12th IEEE Int. Symposium on Parallel and Distributed Processing with Applications / Milan, Italy (Publisher : IEEE, 2014, Pages pages 225 - 230)
Charr, Jean-claude | Couturier, Raphael | Fanfakh, Ahmed | Giersch, Arnaud
pdf | doi | bibtex@inproceedings{ccfg14:ip, title = {Dynamic frequency scaling for energy consumption reduction in synchronous distributed applications}, author = {Charr, Jean-claude and Couturier, Raphael and Fanfakh Badri Muslim, Ahmed and Giersch, Arnaud}, year = {2014}, address = {Milan, Italy}, booktitle = {ISPA 2014, 12th IEEE Int. Symposium on Parallel and Distributed Processing with Applications}, month = {aug}, pages = {225 - 230}, url = {https://publiweb.femto-st.fr/tntnet/entries/9537/documents/author/data}, doi = {10.1109/ISPA.2014.38}, publisher = {IEEE} }

2012 (1)

article - Adaptation and Evaluation of the Multisplitting-Newton and Waveform Relaxation Methods Over Distributed Volatile Environments
International Journal of Parallel Programming (Volume 40, Issue (2), apr 2012, Pages :164--183)
Charr, Jean-claude | Couturier, Raphael | Laiymani, David
pdf | doi

2011 (2)

inproceedings - A Cooperative Tree-based Hybrid GA-B&B Approach for Solving Challenging Permutation-based Problems
GECCO 2011, 13th Conf. on Genetic and Evolutionary Computation Conference / Dublin, Ireland (2011, Pages pages 513--520)
Mehdi, Malika | Charr, Jean-claude | Melab, Nouredine | Talbi, EL-Ghazali | Bouvry, Pascal
doi | bibtex@inproceedings{mcmt+11:ip, title = {A Cooperative Tree-based Hybrid GA-B\&B Approach for Solving Challenging Permutation-based Problems}, author = {Mehdi, Malika and Charr, Jean-Claude and Melab, Nouredine and Talbi, EL-Ghazali and Bouvry, Pascal}, year = {2011}, address = {Dublin, Ireland}, booktitle = {GECCO 2011, 13th Conf. on Genetic and Evolutionary Computation Conference}, month = {jul}, pages = {513--520}, doi = {10.1145/2001576.2001647} }
article - JACEP2P-V2: a Fully Decentralized and Fault Tolerant Environment for Executing Parallel Iterative Asynchronous Applications on Volatile Distributed Architectures
Future Generation Computer Systems-The International Journal of eScience (Volume 27, Issue (5), may 2011, Pages :606--613)
Charr, Jean-claude | Couturier, Raphael | Laiymani, David
pdf | doi

2010 (1)

article - A Decentralized and Fault Tolerant Convergence Detection Algorithm for Asynchronous Iterative Algorithms
The Journal of Supercomputing (Volume 53, Issue (2), apr 2010, Pages :269 - 292)
Charr, Jean-claude | Couturier, Raphael | Laiymani, David
pdf | doi

2009 (3)

article - A Parallel Algorithm to Solve Large Stiff ODE Systems on Grid Systems
International Journal of High Performance Computing Applications (IJHPCA) (Volume 23, Issue (2), may 2009, Pages :140 - 151)
Bahi, Jacques | Charr, Jean-claude | Couturier, Raphael | Laiymani, David
pdf | doi
inproceedings - JACEP2P-V2: a Fully Decentralized and Fault Tolerant Environment for Executing Parallel Iterative Asynchronous Applications on Volatile Distributed Architectures
GPC'09, 4th Int. Conf. on Grid and Pervasive Computing / Geneva, Switzerland (Volume 5529, Series Lecture Notes in Computer Science (LNCS), 2009, Pages pages 446 - 458)
Couturier, Raphael | Laiymani, David | Charr, Jean-claude
pdf | doi | bibtex@inproceedings{ccl09a:ip, title = {JACEP2P-V2: a Fully Decentralized and Fault Tolerant Environment for Executing Parallel Iterative Asynchronous Applications on Volatile Distributed Architectures}, author = {Couturier, Raphael and Laiymani, David and Charr, jean-Claude}, year = {2009}, address = {Geneva, Switzerland}, booktitle = {GPC'09, 4th Int. Conf. on Grid and Pervasive Computing}, month = {may}, pages = {446 - 458}, url = {http://dx.doi.org/10.1007/978-3-642-01671-4_40}, volume = {5529}, doi = {10.1007/978-3-642-01671-4_40}, series = {Lecture Notes in Computer Science (LNCS)} }
inproceedings - Parallel Numerical Asynchronous Iterative Algorithms: Large Scale Experimentations
IPDPS'09, 23-rd IEEE/ACM Int. Parallel and Distributed Processing Symposium / Roma, Italy (2009, Pages pages 1--8)
Couturier, Raphael | Laiymani, David | Charr, Jean-claude
pdf | doi | bibtex@inproceedings{ccl09b:ip, title = {Parallel Numerical Asynchronous Iterative Algorithms: Large Scale Experimentations}, author = {Charr, Jean-Claude and Couturier, Rapha\"el and Laiymani, David}, year = {2009}, address = {Roma, Italy}, booktitle = {IPDPS'09, 23-rd IEEE/ACM Int. Parallel and Distributed Processing Symposium}, month = {may}, pages = {1--8}, url = {http://dx.doi.org/10.1109/IPDPS.2009.5161158}, doi = {10.1109/IPDPS.2009.5161158} }

2007 (1)

inproceedings - A Parallel Algorithm to Solve Large Stiff ODE Systems on Grid Systems
Cluster 2007, Int. Conf. on Cluster Computing / Austin, Texas, United States (2007, Pages pages 534--541)
Bahi, Jacques | Couturier, Raphael | Laiymani, David | Charr, Jean-claude
pdf | doi | bibtex@inproceedings{bccl07:ip, title = {A Parallel Algorithm to Solve Large Stiff ODE Systems on Grid Systems}, author = {Bahi, Jacques and Charr, Jean-Claude and Couturier, Rapha\"el and Laiymani, David}, year = {2007}, address = {Austin, Texas, United States}, booktitle = {Cluster 2007, Int. Conf. on Cluster Computing}, pages = {534--541}, url = {http://dx.doi.org/10.1109/CLUSTR.2007.4629280}, doi = {10.1109/CLUSTR.2007.4629280} }